Sequencings

Markers / CYP2C19

rs12248560

CYP2C19 *17, increased function

GeneCYP2C19
Positionchr10:96,521,657
VersionsC / T
Evidenceestablished

What this position does

The opposite variant: a promoter change that makes more enzyme than usual.

What each result means

If you carryWhat it means
No copies of the effect version
CC
No *17 copy
Normal expression at this position.
One copy
CT
One *17 copy
Rapid metaboliser. Drugs cleared by this enzyme may be cleared faster than expected.
Two copies
TT
Two *17 copies
Ultrarapid metaboliser. Stomach-acid drugs and some antidepressants may be cleared too fast to reach a useful level at standard doses.

How common each version is

Ancestry groupT (the effect version)
African23.5%
American12.0%
East Asian1.5%
European22.4%
South Asian13.6%

1000 Genomes Project phase 3, via Ensembl, retrieved 2026-09-23. These groupings are coarse and flatten a great deal of internal diversity, particularly within Africa. A variant being common somewhere tells you where a piece of your ancestry probably comes from, and nothing else.

How many people carry each result

Ancestry groupCCCTTT
African384 / 661243 / 66134 / 661
European300 / 503181 / 50322 / 503
East Asian489 / 50415 / 5040 / 504
South Asian368 / 489109 / 48912 / 489
American270 / 34771 / 3476 / 347

Counts of people, not modelled frequencies: every one of the 2,504 individuals sequenced by the 1000 Genomes Project phase 3, tallied by the genotype they carry. Deriving these from allele frequencies instead would assume random mating inside each group and undercount the homozygotes.

How to find out which you have

If you have taken a test with 23andMe, AncestryDNA, MyHeritage, Family Tree DNA, TellMeGen or Living DNA, this position is very likely already in the raw data file they gave you. You do not need another test.

One thing to watch if you look it up by hand: testing companies report some positions from one DNA strand and some from the other, and the file does not say which. Read the letters as they appear and you will get the opposite of the truth for some positions. Sequencings resolves that automatically.

Source

CPIC Guideline for Clopidogrel and CYP2C19

Coordinates and allele pair verified against Ensembl GRCh37. Direction of effect verified against VEP protein consequences or 1000 Genomes population frequency. Category: Medicine response.

Related

All markers in CYP2C19

Where this fits

Common questions

What is rs12248560?

rs12248560 is a position in the CYP2C19 gene on chromosome 10. The opposite variant: a promoter change that makes more enzyme than usual.

What does it mean if I have TT at rs12248560?

Two *17 copies. Ultrarapid metaboliser. Stomach-acid drugs and some antidepressants may be cleared too fast to reach a useful level at standard doses.

What does it mean if I have CC at rs12248560?

No *17 copy. Normal expression at this position.

How do I find out my rs12248560 genotype?

If you have taken a home DNA test, this position is very likely in the raw data file you were given. Sequencings reads that file in your browser without uploading it, and resolves which DNA strand each position was reported from, which is the step most manual lookups get wrong.

This is reference information, not medical advice, and not a diagnosis. See the medical disclaimer. Category: Medicine response.